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Items submitted by Dr Kieran Smallbone

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Number of items submitted by this user: 41

2008.80: K. Smallbone, E. Simeonidis, D.S. Broomhead and D.B. Kell (2007) Something from nothing: bridging the gap between constraint-based and kinetic modelling. FEBS Journal, 274 (21). pp. 5576-5585. ISSN 0014-2956

2008.81: C.J. Kelly, K. Smallbone and J.M. Brady (2008) Tumour glycolysis: the many faces of HIF. Journal of Theoretical Biology, 254 (2). pp. 508-513. ISSN 0022-5193

2008.89: M.J. Herrgård, N. Swainston, P. Dobson, W.B. Dunn, K.Y. Arga, M. Arvas, N. Blüthgen, S. Borger, R. Costenoble, M. Heinemann, M. Hucka, N. Le Novère, P Li, W. Liebermeister, M.L. Mo, A.P. Oliveira, D. Petranovic, S. Pettifer, E. Simeonidis, K. Smallbone, I. Spasić, D. Weichart, R. Brent, D.S. Broomhead, H.V. Westerhoff, B.I. Kırdar, M. Penttilä, E. Klipp, B.Ø. Palsson, U. Sauer, S.G. Oliver, P. Mendes, J. Nielsen and D.B. Kell (2008) A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology. Nature Biotechnology, 16. pp. 1155-1160. ISSN 1087-0156

2008.88: K. Smallbone, R.A. Gatenby and P.K. Maini (2008) Mathematical modelling of tumour acidity. Journal of Theoretical Biology, 255 (1). pp. 106-112. ISSN 0022-5193

2009.13: Merim Bilalić, Kieran Smallbone, Peter McLeod and Fernand Gobet (2009) Why are (the best) women so good at chess? Participation rates and gender differences in intellectual domains. Proceedings of the Royal Society B - Biological Sciences, 276. pp. 1161-1165.

2009.20: C.J. Kelly, K. Smallbone, T. Roose and J.M. Brady (2007) A model to investigate the feasibility of FDG as a surrogate marker of hypoxia. In: ISBI 2007. 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 12-15 April 2007, Washington DC.

2009.23: Kieran Smallbone and Evangelos Simeonidis (2008) Flux balance analysis: A geometric perspective. Journal of Theoretical Biology. ISSN 0022-5193

2009.23: Kieran Smallbone and Evangelos Simeonidis (2009) Flux balance analysis: A geometric perspective. Journal of Theoretical Biology, 258 (2). pp. 311-315. ISSN 0022-5193

2009.42: Ettore Murabito, Evangelos Simeonidis, Kieran Smallbone and Jonathan Swinton (2009) Capturing the essence of a metabolic network: A flux balance analysis approach. Journal of Theoretical Biology.

2009.42: Ettore Murabito, Evangelos Simeonidis, Kieran Smallbone and Jonathan Swinton (2009) Capturing the essence of a metabolic network: A flux balance analysis approach. Journal of Theoretical Biology. ISSN 0022-5193

2009.42: Ettore Murabito, Evangelos Simeonidis, Kieran Smallbone and Jonathan Swinton (2009) Capturing the essence of a metabolic network: A flux balance analysis approach. Journal of Theoretical Biology, 260 (3). pp. 445-452. ISSN 0022-5193

2009.93: Kieran Smallbone (2009) One lump or two?

2009.96: Kieran D Smallbone, Philip K Maini and Robert A Gatenby (2009) Episodic, transient systemic acidosis delays evolution of the malignant phenotype: Possible mechanism for cancer prevention by increased physical activity. Biology Direct.

2009.100: Marcus J. Tindall, Louise Dyson, Kieran Smallbone and Philip K. Maini (2009) Modelling acidosis and the cell cycle in multicellular tumour spheroids.

2009.99: Alexander G. Shaw, Robert J. Platt, Jennifer K. Withers, Nils Blüthgen, Kieran Smallbone and Dean A. Jackson (2009) A stochastic-hybrid Model of DNA replication in mammalian cells.

2009.102: Kieran Smallbone, Evangelos Simeonidis, Neil Swainston and Pedro Mendes (2009) Towards a genome-scale kinetic model of cellular metabolism. BMC Systems Biology.

2009.102: Kieran Smallbone, Evangelos Simeonidis, Neil Swainston and Pedro Mendes (2010) Towards a genome-scale kinetic model of cellular metabolism. BMC Systems Biology, 4. 6.

2009.96: Kieran D Smallbone, Philip K Maini and Robert A Gatenby (2010) Episodic, transient systemic acidosis delays evolution of the malignant phenotype: Possible mechanism for cancer prevention by increased physical activity. Biology Direct, 5 (22).

2010.45: Philip K Maini, Robert A Gatenby and Kieran Smallbone (2010) Modelling Aspects of Tumour Metabolism. In: International Congress of Mathematicians, 19-27 August 2010, Hyderabad, India.

2010.45: Philip K Maini, Robert A Gatenby and Kieran Smallbone (2010) Modelling Aspects of Tumour Metabolism. In: Proceedings. International Congress of Mathematicians, Hyderabad, India, pp. 3091-3104.

2010.82: Neil Swainston, Martin Golebiewski, Hanan L. Messiha, Naglys Malys, Renate Kania, Sylvestre Kengne, Olga Krebs, Saqib Mir, Heidrun Sauer-Danzwith, Kieran Smallbone, Andreas Weidemann, Ulrike Wittig, Douglas B. Kell, Pedro Mendes, Wolfgang Müller, Norman W. Paton and Isabel Rojas (2010) Enzyme kinetics informatics: from instrument to browser. FEBS Journal, 277. pp. 3769-3779.

2010.85: Evangelos Simeonidis, Ettore Murabito, Kieran Smallbone and Hans V. Westerhoff (2010) Why does yeast ferment? A flux balance analysis study. Biochemical Society Transactions, 38. pp. 1225-1229.

2011.27: Mark Muldoon, Jeremy Huke and Kieran Smallbone (2011) Dave Broomhead's 60th Birthday. Mathematics Today, 47 (2). pp. 68-69.

2011.35: Ettore Murabito, Kieran Smallbone, Jonathan Swinton, Hans V. Westerhoff and Ralf Steuer (2011) A probabilistic approach to identify putative drug targets in biochemical networks. Journal of the Royal Society Interface, 8 (59). pp. 880-895.

2011.76: Kieran Smallbone, Naglis Malys, Hanan L. Messiha, Jill A. Wishart and Evangelos Simeonidis (2011) Building a kinetic model of trehalose biosynthesis in Saccharomyces cerevisiae. In: Daniel Jameson, Malkhey Verma and Hans V. Westerhoff, (eds). Methods in Systems Biology. Methods in Enzymology, 500. Elsevier, pp. 355-370. ISBN 978-0-12-385118-5

2011.94: Pedro Mendes, Kieran Smallbone and Natalie Stanford (2011) Kinetic modelling of large-scale metabolic networks. In: Proceedings of the 9th International Conference on Computational Methods in Systems Biology. Institut Henri Poincaré, Paris, France. ISBN 978-1-4503-0817-5

2011.96: Oluwafemi Davies, Pedro Mendes, Kieran Smallbone and Naglis Malys (2011) Characterisation of multiple substrate-specific (d)ITP/(d)XTPase and modelling of deaminated purine nucleotide metabolism. BMB Reports, 44 (11).

2011.97: Natalie J. Stanford and Kieran Smallbone (2011) Kinetic modelling of metabolic pathways. The Bioinformatics Knowledgeblog.

2009.100: Marcus J. Tindall, Louise Dyson, Kieran Smallbone and Philip K. Maini (2011) Modelling acidosis and the cell cycle in multicellular tumour spheroids. Journal of Theoretical Biology.

2012.6: Natalie J. Stanford, Kieran Smallbone and Pedro Mendes (2012) Letting the flux define the kinetics: using a single steady state to predict network behaviour under diverse stress conditions.

2012.9: Dave Lee, Kieran Smallbone, Warwick B. Dunn, Ettore Murabito, Catherine L. Winder, Douglas B. Kell, Pedro Mendes and Neil Swainston (2012) Constraining flux balance analysis with genome-scale data.

2009.100: Marcus J. Tindall, Louise Dyson, Kieran Smallbone and Philip K. Maini (2012) Modelling acidosis and the cell cycle in multicellular tumour spheroids. Journal of Theoretical Biology, 298. pp. 107-115.

2012.51: Benjamin D Heavner, Kieran Smallbone, Brandon Barker, Pedro Mendes and Larry P Walker (2012) Yeast 5 – an Expanded Reconstruction of the Saccharomyces Cerevisiae Metabolic Network. BMC Systems Biology.

2012.53: Emma Mulliner, Kieran Smallbone and Vida Maliene (2012) An Assessment of sustainable housing affordability using a multiple criteria decision making method. Omega.

2011.96: Oluwafemi Davies, Pedro Mendes, Kieran Smallbone and Naglis Malys (2012) Characterisation of multiple substrate-specific (d)ITP/(d)XTPase and modelling of deaminated purine nucleotide metabolism. BMB Reports, 45 (4). pp. 259-264.

2012.57: Kieran Smallbone and Natalie J. Stanford (2012) Kinetic modelling of metabolic pathways: Application to serine biosynthesis. In: Hal S. Alper, (eds). Systems Metabolic Engineering: Methods and Protocols. Methods in Molecular Biology. Humana Press.

2012.9: Dave Lee, Kieran Smallbone, Warwick B. Dunn, Ettore Murabito, Catherine L. Winder, Douglas B. Kell, Pedro Mendes and Neil Swainston (2012) Improving metabolic flux predictions using absolute gene expression data. BMC Systems Biology.

2012.51: Benjamin D Heavner, Kieran Smallbone, Brandon Barker, Pedro Mendes and Larry P Walker (2012) Yeast 5 - an Expanded Reconstruction of the Saccharomyces Cerevisiae Metabolic Network. BMC Systems Biology, 6 (55).

2012.53: Emma Mulliner, Kieran Smallbone and Vida Maliene (2013) An assessment of sustainable housing affordability using a multiple criteria decision making method. Omega, 41 (2). pp. 270-279.

2012.9: Dave Lee, Kieran Smallbone, Warwick B. Dunn, Ettore Murabito, Catherine L. Winder, Douglas B. Kell, Pedro Mendes and Neil Swainston (2012) Improving metabolic flux predictions using absolute gene expression data. BMC Systems Biology, 6 (73).

2012.115: José M. Cañete-Valdeón, Roel Wieringa and Kieran Smallbone (2012) Mechanistic modelling of cancer: some reflections from software engineering and philosophy of science. Naturwissenschaften, 99. pp. 973-983.