You are here: MIMS > EPrints
MIMS EPrints

Subject: 92 Biology and other natural sciences

Number of items: 104.

2015.60: Alejandro F. Villaverde, David Henriques, Kieran Smallbone, Sophia Bongard, Joachim Schmid, Damjan Cicin-Sain, Anton Crombach, Julio Saez-Rodriguez, Klaus Mauch, Eva Balsa-Canto, Pedro Mendes, Johannes Jaeger and Julio Banga (2015) BioPreDyn-bench: a suite of benchmark problems for dynamic modelling in systems biology. BMC Systems Biology, 9 (8).

2015.59: Kieran Smallbone and Bernard M. Corfe (2014) A mathematical model of the colon crypt capturing compositional dynamic interactions between cell types. International Journal of Experimental Pathology, 95 (1). pp. 1-7.

2015.58: Kieran Smallbone and Pedro Mendes (2013) Large-Scale Metabolic Models: From Reconstruction to Differential Equations. Industrial Biotechnology, 9 (4). pp. 179-184.

2015.57: Kieran Smallbone, Hanan L. Messiha, Kathleen M. Carroll, Catherine L. Winder, Naglis Malys, Warwick B. Dunn, Ettore Murabito, Neil Swainston, Joseph O. Dada, Farid Khan, Pınar Pir, Evangelos Simeonidis, Irena Spasić, Jill Wishart, Dieter Weichart, Neil W. Hayes, Daniel Jameson, David S. Broomhead, Stephen G. Oliver, Simon J. Gaskell, John E.G. McCarthy, Norman W. Paton, Hans V. Westerhoff, Douglas B. Kell and Pedro Pendes (2013) A model of yeast glycolysis based on a consistent kinetic characterisation of all its enzymes. FEBS Letters, 587 (17). pp. 2832-2841.

2015.56: Natalie J. Stanford, Timo Lubitz, Kieran Smallbone, Edda Klipp, Pedro Mendes and Wolfram Liebermeister (2013) Systematic construction of kinetic models from genome-scale metabolic networks. PLoS ONE, 8 (11). e79195.

2015.55: Ines Thiele, Neil Swainston, Ronan M.T. Fleming, Andreas Hoppe, Swagatika Sahoo, Maike K. Aurich, Hulda Haraldsdottir, Monica L. Mo, Ottar Rolfsson, Miranda D. Stobbe, Stefan G. Thorleifsson, Rasmus Agren, Christian Bölling, Sergio Bordel, Arvind K. Chavali, Paul D. Dobson, Warwick B. Dunn, Lukas Endler, David Hala, Michael Hucka, Daniel Jameson, Neema Jamshidi, Jon J. Jonsson, Nick Juty, Sarah Keating, Intawat Nookaew, Nicolas Le Novère, Naglis Malys, Alexander Mazein, Jason A. Papin, Nathan D. Price, Evgeni Selkov, Sr., Martin I. Sigurdsson, Evangelos Simeonidis, Nikolaus Sonnenschein, Kieran Smallbone, Antony Sorokin, Johannes H.G.M. van Beek, Dieter Weichart, Igor Goryanin, Jens Neilsen, Hans V. Westerhoff, Douglas B, Kell, Pedro M. Mendes and Bernhard Ø. Palsson (2013) A community-driven global reconstruction of human metabolism. Nature Biotechnology, 31 (5). pp. 419-425.

2015.54: Benjamin D. Heavner, Kieran Smallbone, Nathan D. Price and Larry P. Walker (2013) Version 6 of the consensus yeast metabolic network refines biochemical coverage and improves model performance. Database, bat059.

2015.53: Neil Swainston, Kieran Smallbone, Pedro Mendes, Douglas B. Kell and Norman W. Paton (2011) The SuBliMinaL Toolbox: automating steps in the reconstruction of metabolic networks. Journal of Integrative Bioinformatics, 8 (2). 186.

2015.52: Paul D. Dobson, Kieran Smallbone, Daniel Jameson, Evangelos Simeonidis, Karin Lanthaler, Pınar Pir, Chuan Lu, Neil Swainston, Warwick B. Dunn, Paul Fisher, Duncan Hull, Marie Brown, Olusegun Oshota, Natalie J. Stanford, Douglas B. Kell, Ross D. King, Stephen G. Oliver, Robert D. Stevens and Pedrp Mendes (2010) Further developments towards a genome-scale metabolic model of yeast. BMC Systems Biology, 4 (195).

2015.21: Kieran Smallbone and Yunjiao Wang (2015) Mathematising biology.

2014.77: Michael Crabb, John Davidson, Ross Little, Paul Wright, Alexandra Morgan, Chris Miller, Josephine Naish, Geoff Parker, Ron Kikinis, Hugh McCann and William Lionheart (2014) Mutual information as a measure of image quality for 3D dynamic lung imaging with EIT. Physiological Measurement, 35 (5). pp. 863-879.

2014.75: Michael Crabb (2014) EIT Reconstruction Algorithms for Respiratory Intensive Care. PhD thesis, The University of Manchester.

2014.74: Simon Cotter and Radek Erban (2014) Error Analysis of Diffusion Approximation Methods for Multiscale Systems in Reaction Kinetics.

2014.73: Simon Cotter, Klika Vaclav, Laura Kimpton, Sally Collins and Alexander Heazell (2014) A stochastic model for early placental development. Journal of the Royal Society Interface, 11 (97).

2014.63: Tom Shearer (2014) A new strain energy function for the hyperelastic modelling of ligaments and tendons based on fascicle microstructure. Journal of Biomechanics. ISSN 0021-9290

2014.24: Younes Chahlaoui and Margarita Korovina (2014) CICADA Collection.

2013.24: Nicholas F Parrish, Feng Gao, Hui Li, Elena E Giorgi, Hannah J Barbian, Erica H Parrish, Lara Zajic, Shilpa S Iyer, Julie M Decker, Amit Kumar, Bhavna Hora, Anna Berg, Fangping Cai, Jennifer Hopper, Thomas N Denny, Hairao Ding, Christina Ochsenbauer, John C Kappes, Rachel P Galimidi, Anthony P Jr West, Pamela J Bjorkman, Craig B Wilen, Robert W Doms, Meagan O'Brien, Nina Bhardwaj, Persephone Borrow, Barton F Haynes, Mark Muldoon, James P Theiler, Bette Korber, George M Shaw and Beatrice H Hahn (2013) Phenotypic properties of transmitted founder HIV-1. PNAS, 110 (17). pp. 6626-6633. ISSN 1091-6490

2013.23: Hua-Xin Liao, Chun-Yen Tsao, S. Munir Alam, Mark Muldoon, Nathan Vandergrift, Ben-Jiang Ma, Xiaozhi Lu, Laura L Sutherland, Richard M. Scearce, Cindy Bowman, Robert Parks, Haiyan Chen, Julie H Blinn, Alan Lapedes, Sydeaka Watson, Shi-Mao Xia, Andrew Foulger, Beatrice H Hahn, George M Shaw, Ron Swanstrom, David C Montefiori, Feng Gao, Barton F Haynes and Bette Korber (2013) Antigenicity and Immunogenicity of Transmitted/Founder, Consensus, and Chronic Envelope Glycoproteins of Human Immunodeficiency Virus Type 1. Journal of Virology, 87 (8). pp. 4185-4201. ISSN 0022-538X

2012.115: José M. Cañete-Valdeón, Roel Wieringa and Kieran Smallbone (2012) Mechanistic modelling of cancer: some reflections from software engineering and philosophy of science. Naturwissenschaften, 99. pp. 973-983.

2012.101: Marc Goodfellow and Paul Glendinning (2012) Mechanisms of intermittent state transitions in a coupled heterogeneous oscillator model of epilepsy.

2012.75: Sampa Santra, Mark Muldoon, Sydeaka Watson, Adam Buzby, Harikrishnan Balachandran, Kevin R. Carlson, Linh Mach, Wing-Pui Kong, Krishna McKee, Zhi-Yong Yang, Srinivas S. Rao, John R. Mascola, Gary J. Nabel, Bette T, Korber and Norman L. Letvin (2012) Breadth of cellular and humoral immune responses elicited in rhesus monkeys by multi-valent mosaic and consensus immunogens. Virology, 248 (2). pp. 121-127. ISSN 0042-6822

2012.68: Simon C. Bull, Mark R. Muldoon and Andrew J. Doig (2013) Maximising the Size of Non-Redundant Protein Datasets Using Graph Theory. PLoS ONE, 8 (2012.68). e55484. ISSN 1932-6203

2012.57: Kieran Smallbone and Natalie J. Stanford (2013) Kinetic modelling of metabolic pathways: Application to serine biosynthesis. In: Hal S. Alper, (eds). Systems Metabolic Engineering: Methods and Protocols. Methods in Molecular Biology, 985. Humana Press, pp. 113-121.

2012.51: Benjamin D Heavner, Kieran Smallbone, Brandon Barker, Pedro Mendes and Larry P Walker (2012) Yeast 5 - an Expanded Reconstruction of the Saccharomyces Cerevisiae Metabolic Network. BMC Systems Biology, 6 (55).

2012.14: Mark C. Readman and Dimitrios Kalamatianos (2012) Cell Death: Linear Control Analysis of Eissing's Model.

2012.9: Dave Lee, Kieran Smallbone, Warwick B. Dunn, Ettore Murabito, Catherine L. Winder, Douglas B. Kell, Pedro Mendes and Neil Swainston (2012) Improving metabolic flux predictions using absolute gene expression data. BMC Systems Biology, 6 (73).

2012.6: Natalie J. Stanford, Kieran Smallbone and Pedro Mendes (2012) Letting the flux define the kinetics: using a single steady state to predict network behaviour under diverse stress conditions.

2011.97: Natalie J. Stanford and Kieran Smallbone (2011) Kinetic modelling of metabolic pathways. The Bioinformatics Knowledgeblog.

2011.96: Oluwafemi Davies, Pedro Mendes, Kieran Smallbone and Naglis Malys (2012) Characterisation of multiple substrate-specific (d)ITP/(d)XTPase and modelling of deaminated purine nucleotide metabolism. BMB Reports, 45 (4). pp. 259-264.

2011.94: Pedro Mendes, Kieran Smallbone and Natalie Stanford (2011) Kinetic modelling of large-scale metabolic networks. In: Proceedings of the 9th International Conference on Computational Methods in Systems Biology. Institut Henri Poincaré, Paris, France. ISBN 978-1-4503-0817-5

2011.76: Kieran Smallbone, Naglis Malys, Hanan L. Messiha, Jill A. Wishart and Evangelos Simeonidis (2011) Building a kinetic model of trehalose biosynthesis in Saccharomyces cerevisiae. In: Daniel Jameson, Malkhey Verma and Hans V. Westerhoff, (eds). Methods in Systems Biology. Methods in Enzymology, 500. Elsevier, pp. 355-370. ISBN 978-0-12-385118-5

2011.69: James Hook and Dave Broomhead (2011) Stochastic production trees as products of i.i.d. componentwise exponential max-plus matrices.

2011.35: Ettore Murabito, Kieran Smallbone, Jonathan Swinton, Hans V. Westerhoff and Ralf Steuer (2011) A probabilistic approach to identify putative drug targets in biochemical networks. Journal of the Royal Society Interface, 8 (59). pp. 880-895.

2011.13: Jennifer L. Kirchherr, Jennifer Hamilton, Xiaozhi Lu, S. Gnanakaran, Mark Muldoon, Marcus Daniels, Webster Kasongo, Victor Chalwe, Chanda Mulenga, Lawrence Mwananyanda, Rosemary M. Musonda, Xing Yuan, David C. Montefiori, Bette T. Korber, Barton F. Haynes and Feng Gao (2011) Identification of amino acid substitutions associated with neutralization phenotype in the human immunodeficiency virus type-1 subtype C gp120. Virology, 409 (2). pp. 163-174.

2010.85: Evangelos Simeonidis, Ettore Murabito, Kieran Smallbone and Hans V. Westerhoff (2010) Why does yeast ferment? A flux balance analysis study. Biochemical Society Transactions, 38. pp. 1225-1229.

2010.82: Neil Swainston, Martin Golebiewski, Hanan L. Messiha, Naglys Malys, Renate Kania, Sylvestre Kengne, Olga Krebs, Saqib Mir, Heidrun Sauer-Danzwith, Kieran Smallbone, Andreas Weidemann, Ulrike Wittig, Douglas B. Kell, Pedro Mendes, Wolfgang Müller, Norman W. Paton and Isabel Rojas (2010) Enzyme kinetics informatics: from instrument to browser. FEBS Journal, 277. pp. 3769-3779.

2010.45: Philip K Maini, Robert A Gatenby and Kieran Smallbone (2010) Modelling Aspects of Tumour Metabolism. In: Proceedings. International Congress of Mathematicians, Hyderabad, India, pp. 3091-3104.

2010.27: Sampa Santra, Hua-Xin Liao, Ruijin Zhang, Mark Muldoon, Sydeaka Watson, Will Fischer, James Theiler, James Szinger, Harikrishnan Balachandran, Adam Buzby, David Quinn, Robert J. Parks, Chun-Yen Tsao, Angela Carville, Keith G. Mansfield, George N. Pavlakis, Barbara K. Felber, Barton F. Haynes, Bette T. Korber and Norman L. Letvin (2010) Mosaic vaccines elicit CD8+ T lymphocyte responses that confer enhanced immune coverage of diverse HIV strains in monkeys. Nature Medicine, 16 (3). pp. 324-328. ISSN 1546-170X

2010.26: Dan H. Barouch, Kara L. O'Brien, Nathaniel L. Simmons, Sharon L. King, Peter Abbink, Lori F. Maxfield, Ying-Hua Sun, Annalena La Porte, Ambryice M. Riggs, Diana M. Lynch, Sarah L. Clark, Katherine Backus, James R. Perry, Michael S. Seaman, Angela Carville, Keith G. Mansfield, James J. Szinger, Will Fischer, Mark Muldoon and Bette Korber (2010) Mosaic HIV-1 vaccines expand the breadth and depth of cellular immune responses in rhesus monkeys. Nature Medicine, 16 (3). pp. 319-323. ISSN 1546-170X

2010.16: CTJ Dodson (2010) An inhomogeneous stochastic rate process for evolution from states in an information geometric neighbourhood of uniform fitness.

2010.15: Andrew D. Isaac, Mark Muldoon, Keri A. Brown and Terence A. Brown (2010) Genetic analysis of wheat landraces enables the location of the first agricultural sites in Italy to be identified. Journal of Archaeological Science, 37 (5). pp. 950-956. ISSN 0305-4403

2010.14: Jasmina Cehajic-Kapetanovic, Paul N. Bishop, Sidath Liyanage, Trevor King, Mark Muldoon and Ian M. Wearne (2010) A novel Ocular Anaesthetic Scoring System, OASS, tool to measure both motor and sensory function following local anaesthesia. British Journal of Ophthalmology, 94 (1). pp. 28-32. ISSN 0007-1161

2009.105: Yunjiao Wang, David S. Broomhead, Caroline A. Horton, Douglas B. Kell and Michael R. H. White (2009) Oscillations in the NF-κB Signaling Pathway.

2009.104: Yunjiao Wang, Pawel Paszek, Caroline A. Horton, Yue Hong, Michael R. H. White, Douglas B. Kell, Mark R. Muldoon and David S. Broomhead (2012) A systematic survey of the response of a model NF-κB signalling pathway to TNFα stimulation. Journal of Theoretical Biology, 297. pp. 137-147. ISSN 0022-5193

2009.102: Kieran Smallbone, Evangelos Simeonidis, Neil Swainston and Pedro Mendes (2010) Towards a genome-scale kinetic model of cellular metabolism. BMC Systems Biology, 4. 6.

2009.101: Rigmor C. Baraas, Janus J. Kulikowski and Mark R. Muldoon (2010) Bar-like S-cone stimuli reveal the importance of an intermediate temporal filter. Journal of the Optical Society of America A, 27 (4). pp. 766-780. ISSN 1749-9097

2009.100: Marcus J. Tindall, Louise Dyson, Kieran Smallbone and Philip K. Maini (2012) Modelling acidosis and the cell cycle in multicellular tumour spheroids. Journal of Theoretical Biology, 298. pp. 107-115.

2009.99: Alexander G. Shaw, Robert J. Platt, Jennifer K. Withers, Nils Blüthgen, Kieran Smallbone and Dean A. Jackson (2009) A stochastic-hybrid Model of DNA replication in mammalian cells.

2009.96: Kieran D Smallbone, Philip K Maini and Robert A Gatenby (2010) Episodic, transient systemic acidosis delays evolution of the malignant phenotype: Possible mechanism for cancer prevention by increased physical activity. Biology Direct, 5 (22).

2009.93: Kieran Smallbone (2009) One lump or two?

2009.55: N. Martin, R. Koup, R. Kaslow, A. A. Ammann, A. J. Ammann, D. Asthana, A. Baur, Y. Bryson, S. Clapp, S. DeLaurentis, T. Devine, M. Feinberg, J. E. Fitzgibbon, M. G. Fowler, E. M. Garratty, R. Geffin, A. Gonzaga, M. Gray, S. Hetherington, J. K. Jansen, R. A. Kaslow, A. Keller, M. E. Klotman, B. Korber, A. Louzao, K. Luzuriaga, C. Macken, B. Mathieson, G. McSherry, M. Muldoon, J. I. Mullins, K. Nielsen, J. Oleske, P. Palumbo, A. Petru, S. Plaeger, Y. Riviere, P. Rossi, G. Scott, J. L. Sullivan, S. H. Vermund, D. Wara, R. J. Winchester, C. Winkler and S. Zeegen (1996) Workshop on perinatally acquired human immuno-deficiency virus infection in long-term surviving children: A collaborative study of factors contributing to slow disease progression. Aids Research and Human Retroviruses, 12 (16). pp. 1565-1570. ISSN 0889-2229

2009.42: Ettore Murabito, Evangelos Simeonidis, Kieran Smallbone and Jonathan Swinton (2009) Capturing the essence of a metabolic network: A flux balance analysis approach. Journal of Theoretical Biology, 260 (3). pp. 445-452. ISSN 0022-5193

2009.28: Yunjiao Wang, Pawel Paszek, Caroline A. Horton, Douglas B. Kell, Michael R. H. White, David S. Broomhead and Mark R. Muldoon (2011) Interactions among oscillatory pathways in NF-κB signalling. BMC Systems Biology, 5 (1). pp. 1-23. ISSN 1752-0509

2009.23: Kieran Smallbone and Evangelos Simeonidis (2009) Flux balance analysis: A geometric perspective. Journal of Theoretical Biology, 258 (2). pp. 311-315. ISSN 0022-5193

2009.20: C.J. Kelly, K. Smallbone, T. Roose and J.M. Brady (2007) A model to investigate the feasibility of FDG as a surrogate marker of hypoxia. In: ISBI 2007. 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 12-15 April 2007, Washington DC.

2008.89: M.J. Herrgård, N. Swainston, P. Dobson, W.B. Dunn, K.Y. Arga, M. Arvas, N. Blüthgen, S. Borger, R. Costenoble, M. Heinemann, M. Hucka, N. Le Novère, P Li, W. Liebermeister, M.L. Mo, A.P. Oliveira, D. Petranovic, S. Pettifer, E. Simeonidis, K. Smallbone, I. Spasić, D. Weichart, R. Brent, D.S. Broomhead, H.V. Westerhoff, B.I. Kırdar, M. Penttilä, E. Klipp, B.Ø. Palsson, U. Sauer, S.G. Oliver, P. Mendes, J. Nielsen and D.B. Kell (2008) A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology. Nature Biotechnology, 16. pp. 1155-1160. ISSN 1087-0156

2008.88: K. Smallbone, R.A. Gatenby and P.K. Maini (2008) Mathematical modelling of tumour acidity. Journal of Theoretical Biology, 255 (1). pp. 106-112. ISSN 0022-5193

2008.81: C.J. Kelly, K. Smallbone and J.M. Brady (2008) Tumour glycolysis: the many faces of HIF. Journal of Theoretical Biology, 254 (2). pp. 508-513. ISSN 0022-5193

2008.80: K. Smallbone, E. Simeonidis, D.S. Broomhead and D.B. Kell (2007) Something from nothing: bridging the gap between constraint-based and kinetic modelling. FEBS Journal, 274 (21). pp. 5576-5585. ISSN 0014-2956

2008.79: Sampa Santra, Bette T. Korber, Mark Muldoon, Dan H. Barouch, Gary J. Nabel, Feng Gao, Beatrice H. Hahn, Barton F. Haynes and Norman L. Letvin (2008) A centralized gene-based HIV-1 vaccine elicits broad cross-clade cellular immune responses in rhesus monkeys. Proceedings of the National Academy of Sciences of the USA, 105 (30). pp. 10489-10494. ISSN 0027-8424

2008.78: Shovonlal Roy (2008) Spatial interaction among nontoxic phytoplankton, toxic phytoplankton, and zooplankton:Emergence in space and time. Journal of Biological Physics. ISSN 1573-0689

2008.58: Erich Bohl, Ryan Hamilton and Peter Lancaster (2008) Phylogenetic Trees Predicted by an Irreversible Markov Process.

2007.136: Nicole Frahm, Daniel E. Kaufmann, Karina Yusim, Mark Muldoon, Can Kesmir, Caitlyn H. Linde, Will Fischer, Todd M. Allen, Bin Li, Ben H. McMahon, Kellie L. Faircloth, Hannah S. Hewitt, Elizabeth W. Mackey, Toshiyuki Miura, Ashok Khatri, Steven Wolinsky, Andrew McMichael, Robert K. Funkhouser, Bruce D. Walker, Christian Brander and Bette T. Korber (2007) Increased Sequence Diversity Coverage Improves Detection of HIV-Specific T Cell Responses. Journal of Immunology, 179 (10). pp. 6638-6650. ISSN 0022-1767

2007.118: Rong Rong, S. Gnanakaran, Julie M. Decker, Frederic Bibollet-Ruche, Jesse Taylor, Jeffrey N. Sfakianos, John L. Mokili, Mark Muldoon, Joseph Mulenga, Susan Allen, Beatrice H. Hahn, George M. Shaw, Jerry L. Blackwell, Bette T. Korber, Eric Hunter and Cynthia A. Derdeyn (2007) Unique Mutational Patterns in the Envelope α2 Amphipathic Helix and Acquisition of Length in gp120 Hypervariable Domains Are Associated with Resistance to Autologous Neutralization of Subtype C Human Immunodeficiency Virus Type 1. Journal of Virology, 81 (11). pp. 5658-5668. ISSN 0022-538X

2007.114: Yu-Dong Cai, Chi-Hung Jen, Jiang Qian, ZiLiang Qian and Mark Muldoon (2007) Prediction of regulatory networks: identification of transcription factor-target relationship from gene ontology information and gene expression data.

2007.111: C.J. Riley, M.R. Muldoon, J.P. Huke and D.S. Broomhead (2007) Does Reaction-diffusion Dynamics on a Fractal Space Imply Power Law Behaviour?

2007.110: Yu-Dong Cai and Mark Muldoon (2007) Metabolic Pathway Modeling by Using the Nearest Neighbor Algorithm.

2007.105: Ben Routley and Mark R. Muldoon (2007) Review: Practical Design and Analysis of 2-Colour cDNA Microarray Experiments.

2007.104: Ben Routley and Mark R. Muldoon (2007) Llama: an online microarray linear analysis tool.

2007.77: Hitesh Mistry (2007) Stochastic Modeling of Gene Regulatory Networks. PhD thesis, The University of Manchester.

2007.23: Andrew L. Hazel and Matthias Heil (2002) The steady propagation of a semi-infinite bubble into a tube of elliptical or rectangular cross-section. Journal of Fluid Mechanics, 470. pp. 91-114. ISSN 0022-1120

2007.22: Andrew L. Hazel and Matthias Heil (2005) Surface-tension-induced buckling of liquid-lined elastic tubes: a model pulmonary airway closure. Proceedings of the Royal society A, 461 (2058). pp. 1847-1868. ISSN 1471-2946

2007.20: Matthias Heil and Sarah L. Waters (2006) Transverse flows in rapidly oscillating elastic cylindrical shells. Journal of Fluid Mechanics, 547. pp. 185-214. ISSN 0022-1120

2007.11: Denise L. Kothe, Julie M. Decker, Yingying Li, Zhiping Weng, Frederic Bibollet-Ruche, Kenneth P. Zammit, Maraia G. Slazar, Yalu Chen, Jesus F. Salazar-Gonzalez, Zina Moldoveanu, Jiri Mestecky, Feng Gao, Barton F. Haynes, George M. Shaw, Mark Muldoon, Bette T. M. Korber and Beatrice H. Hahn (2007) Antigenicity and immunogenicity of HIV-1 consensus subtype B envelope glycoproteins. Virology, 360 (1). pp. 218-234. ISSN 0042-6822

2007.7: Carole Tham (2006) Stochastic Resonance in Vision: Models and Data. PhD thesis, The University of Manchester.

2007.6: Caroline J. Riley (2006) Reaction and Diffusion on the Sierpinski Gasket. PhD thesis, The University of Manchester.

2006.403: Xuejun Liu (2006) Microarray Data Analysis Using Probabilistic Methods. PhD thesis, The University of Manchester.

2006.354: C. T. H. Baker, G. A. Bocharov, J. M. Ford, P. M. Lumb, S. J. Norton, C. A. H. Paul, T. Junt, P. Krebs and B. Ludewig (2005) Computational approahes to parameter estimation and model selection in immunology. Journal of Computational and Applied Mathematics, 184 (1). pp. 50-76. ISSN 0377-0427

2006.341: Frank Ball and Peter Neal (2004) Poisson approximations for epidemics with two levels of mixing. The Annals of Probability, 32 (1B). pp. 1168-1200. ISSN 0091-1798

2006.238: Oliver E. Jensen and Matthias Heil (2003) High-frequency self-excited oscillations in a collapsible-channel flow. Journal of Fluid Mechanics, 481. pp. 235-268. ISSN 0022-1120

2006.236: Andrew L. Hazel, G.M. Grzybowski and M.H. Friedman (2003) Modelling the adaptive permeability of porcine iliac arteries to acute changes in mural shear. Annals of Biomedical Engineering, 31 (4). pp. 412-419. ISSN 0090-6964

2006.235: Andrew L. Hazel and Matthias Heil (2003) Three-dimensional airway reopening: the steady propagation of a semi-indefinite bubble into a buckled elastic tube. Journal of Fluid Mechanics, 478. pp. 47-70. ISSN 0022-1120

2006.234: Andrew L. Hazel and Matthias Heil (2003) Steady finite-Reynolds-number flows in three-dimensional collapsible tubes. Journal of Fluid Mechanics, 486. pp. 79-103. ISSN 0022-1120

2006.202: Eric A. Weaver, Zhongjing Lu, Zenadio T. Camacho, Fatiha Moukdar, Hua-Xin Liao, Ben-Jiang Ma, Mark Muldoon, James Theiler, Gary J. Nabel, Norman L. Letvin, Bette T. Korber, Beatrice H. Hahn, Barton F. Haynes and Feng Gao (2006) Cross-Subtype T-Cell Immune Responses Induced by a Human Immunodeficiency Virus Type 1 Group M Consensus Env Immunogen. Journal of Virology, 80 (14). pp. 6745-6756. ISSN 0022-538X

2006.138: J. E. Forster, R. V. Abadi, M. Muldoon and I. C. Lloyd (2006) Grading infantile cataracts. Ophthalmic and Physiological Optics, 26 (4). pp. 372-379. ISSN 0275-5408

2006.126: D.J.T. Sumpter and D.S. Broomhead (2001) Relating Individual Behaviour to Population Dynamics. Proceedings of the Royal Society B: Biological Sciences, 268 (1470). pp. 925-932. ISSN 0962-8452

2006.87: Paul Glendinning (2004) The Mathematics of Motion Camouflage. Proceedings of the Royal Society (London) Series B, 271. pp. 477-481. ISSN 0962-8452

2006.67: Yunzhen Cao, Paul Krogstad, Bette T. Korber, Richard A. Koup, Mark Muldoon, Catherine Macken, Jia-Li Song, Zhanqun Jin, Jla-Qi Zhao, Sheila Clapp, Irvin S. Y. Chen, David D. Ho, Arthur J. Ammann and the Ariel Project Investigators (1997) Maternal HIV-1 viral load and vertical transmission of infection: The Ariel Project for the prevention of HIV transmission from mother to infant. Nature Medicine, 3 (5). pp. 549-552. ISSN 1078-8956

2006.66: Cynthia A. Derdeyn, Julie M. Decker, Frederic Bibollet-Ruche, John L. Mokili, Mark Muldoon, Scott A. Denham, Marintha L. Heil, Francis Kasolo, Rosemary Musonda, Beatrice H. Hahn, George M. Shaw, Bette T. Korber, Susan Allen and Eric Hunter (2004) Envelope-Constrained Neutralization-Sensitive HIV-1 After Heterosexual Transmission. Science, 303. pp. 2019-2022. ISSN 0036-8075

2006.63: R. B. Van Dyke, B. T. Korber, E. Popek, C. Macken, S. M. Widmayer, A. Bardeguez, I. C. Hanson, A. Wiznia, K. Luzuriaga, R. R. Viscarello, S. Wolinsky and the Ariel Core Investigators (1999) The Ariel Project: A prospective cohort study of maternal-child transmission of human immunodeficiency virus type 1 in the era of maternal antiretroviral therapy. Journal of Infectious Diseases, 179 (2). pp. 319-328. ISSN 0022-1899

2006.62: D. S. Broomhead, R. A. Clement, M. R. Muldoon, J. P. Whittle, C. Scallan and R. V. Abadi (2000) Modelling of congenital nystagmus waveforms produced by saccadic system abnormalities. Biological Cybernetics, 82 (5). pp. 391-399. ISSN 0340-1200

2006.47: Pete Neal (2006) Stochastic and Deterministic Analysis of SIS Household Epidemics.

2006.29: B. Korber, M. Muldoon, J. Theiler, F. Gao, R. Gupta, A. Lapedes, B. H. Hahn, S. Wolinsky and T. Bhattacharya (2000) Timing the Ancestor of the HIV-1 Pandemic Strains. Science, 288 (5472). pp. 1786-1796. ISSN 0036-8075

2006.28: Ozgur Akman (2003) Analysis of a nonlinear dynamics model of the saccadic system. PhD thesis, University of Manchester Institute of Science and Technology (UMIST).

2006.27: O. E. Akman, D. S. Broomhead, R. A. Clement and R. V. Abadi (2006) Nonlinear time series analysis of jerk congenital nystagmus.

2006.24: Peter Neal (2006) Multitype randomised Reed-Frost epidemics and epidemics upon random graphs.

2006.23: O. E. Akman, D. S. Broomhead, R. V. Abadi and R. A. Clement (2005) Eye movement instabilities and nystagmus can be predicted by a nonlinear dynamics model of the saccadic system. Journal of Mathematical Biology, 51 (6). pp. 661-694. ISSN 1432-1416

2006.19: Trevor Platt, David S. Broomhead, Shubha Sathyendranath, Andrew M. Edwards and Eugene J. Murphy (2003) Phytoplankton biomass and residual nitrate in the pelagic ecosystem. Proceedings of the Royal Society of London, Series A, 459 (2033). pp. 1063-1073. ISSN 1471-2946

2006.7: Karina Yusim, Martine Peters, Oliver Pybus, Tanmoy Bhattacharya, Eric Delaporte, Claire Mulanaga, Mark Muldoon, James Theiler and Bette Korber (2001) Using human immunodeficiency virus type 1 sequences to infer historical features of the acquired immune deficiency syndrome epidemic and human immunodeficiency virus evolution. Philosophical Transactions of the Royal Society of London, B, 356 (1410). pp. 855-866. ISSN 0962-8436

2006.4: Anna Mills, Stephen Marsland and Tony Shardlow (2006) Computing the Geodesic Interpolating Spline.

2005.30: Xia Jin, Caroline G. P. Roberts, Douglas F. Nixon, Yunzhen Cao, David D. Ho, Bruce D. Walker, Mark Muldoon, Bette T. M. Korber, Richard A. Koup and the ARIEL Project Investigators (1998) Longitudinal and Cross-Sectional Analysis of Cytotoxic T Lymphocyte (CTL) Responses and their Relationship to Vertical HIV Transmission. Journal of Infectious Diseases, 178 (5). pp. 1317-1326. ISSN 0022-1899

2005.18: Matthias Heil and Andrew Hazel (2003) Mass transfer from a finite strip near an oscillating stagnation point --- implications for atherogenesis. Journal of Engineering Mathematics, 47. pp. 315-334. ISSN 0022-0833

2005.4: K. Berthelot, M. Muldoon, L. Rajkowitsch, J. Hughes and J. E. G. McCarthy (2004) Dynamics and processivity of 40S ribosome scanning on mRNA in yeast. Molecular Microbiology, 51 (4). pp. 987-1002. ISSN 0950-382X

2005.3: R. A. Clement, J. P. Whittle, M. R. Muldoon, R. V. Abadi, D. S. Broomhead and O. Akman (2002) Characterisation of congenital nystagmus waveforms in terms of periodic orbits. Vision Research, 42 (17). pp. 2123-2130. ISSN 0042-6989

This list was generated on Wed Jul 29 22:48:35 BST 2015.